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1

Engineering a software tool for gene structure prediction in higher organisms

Gordon Gremme, Volker Brendel, Michael E. Sparks, Stefan Kurtz

Journal:

Information and Software Technology

Year:

2005

Language:

english

File:

PDF, 218 KB

english, 2005

2

In defence of Fourier

BRENDEL, VOLKER, LEVINE, HAROLD

Journal:

Year:

1991

File:

PDF, 152 KB

1991

3

U-richness is a defining feature of plant introns and may function as an intron recognition signal in maize

Christopher H. Ko, Volker Brendel, Rebecca D. Taylor, Virginia Walbot

Journal:

Plant Molecular Biology

Year:

1998

Language:

english

File:

PDF, 111 KB

english, 1998

4

Kinetic Analysis of Adsorption Processes

Brendel, Volker, Perelson, Alan S.

Journal:

SIAM Journal on Applied Mathematics

Year:

1987

Language:

english

File:

PDF, 1.27 MB

english, 1987

5

Kinetic Analysis of Adsorption Processes

Volker Brendel and Alan S. Perelson

Journal:

SIAM Journal on Applied Mathematics

Year:

1987

Language:

english

File:

PDF, 1.34 MB

english, 1987

6

Methods and Algorithms for Statistical Analysis of Protein Sequences

Volker Brendel, Philipp Bucher, Illah R. Nourbakhsh, B. Edwin Blaisdell and Samuel Karlin

Journal:

Proceedings of the National Academy of Sciences

Year:

1992

Language:

english

File:

PDF, 1.08 MB

english, 1992

7

First Clinical Experience with Extracorporeally Induced Destruction of Kidney Stones by Shock Waves

Chaussy, Christian, Schmiedt, Egbert, Jocham, Dieter, Brendel, Walter, Forssmann, Bernd, Walther, Volker

Journal:

The Journal of Urology

Year:

2017

File:

PDF, 831 KB

2017

8

First Clinical Experience with Extracorporeally Induced Destruction of Kidney Stones by Shock Waves

Chaussy, Christian, Schmiedt, Egbert, Jocham, Bieter, Brendel, Walter, Forssmann, Bernd, Walther, Volker

Journal:

The Journal of Urology

Year:

1982

Language:

english

File:

PDF, 267 KB

english, 1982

9

Applications of statistical criteria in protein sequence analysis: Case study of yeast RNA polymerase II subunits

Volker Brendel, Samuel Karlin

Journal:

Computers & Chemistry

Year:

1994

Language:

english

File:

PDF, 257 KB

english, 1994

10

PROSET—a fast procedure to create non-redundant sets of protein sequences

Journal:

Mathematical and Computer Modelling

Year:

1992

Language:

english

File:

PDF, 541 KB

english, 1992

11

A note on stochastic models for bacterial adhesion

Volker Brendel, Alan S. Perelson

Journal:

Journal of Theoretical Biology

Year:

1987

Language:

english

File:

PDF, 116 KB

english, 1987

12

A combinatorial role for exon, intron and splice site sequences in splicing in maize

Jose C. Carle-Urioste, Volker Brendel, Virginia Walbot

Journal:

The Plant Journal

Year:

1997

File:

PDF, 1.46 MB

1997

13

A comparative analysis of distinctive features of yeast protein sequences

Ronald J. Sapolsky, Volker Brendel, Samuel Karlin

Journal:

Year:

1993

Language:

english

File:

PDF, 1.03 MB

english, 1993

14

Evolutionary Comparisons of RecA-Like Proteins Across All Major Kingdoms of Living Organisms

Volker Brendel, Luciano Brocchieri, Steven J. Sandler, Alvin J. Clark, Samuel Karlin

Journal:

Journal of Molecular Evolution

Year:

1997

Language:

english

File:

PDF, 1.53 MB

english, 1997

15

Effects of the chromanol HMR 1556 on potassium currents in atrial myocytes

Ralph F. Bosch, Alexander C. Schneck, Saskia Csillag, Bernd Eigenberger, Uwe Gerlach, Joachim Brendel, Hans J. Lang, Christian Mewis, Heinz Gögelein, Ludger Seipel, Volker Kühlkamp

Journal:

Naunyn-Schmiedeberg's Archives of Pharmacology

Year:

2003

Language:

english

File:

PDF, 267 KB

english, 2003

16

Expression and evolution of the phosphoinositide-specific phospholipase C gene family in Arabidopsis thaliana

I. Made Tasma, Volker Brendel, Steven A. Whitham, Madan K. Bhattacharyya

Journal:

Plant Physiology and Biochemistry

Year:

2008

Language:

english

File:

PDF, 458 KB

english, 2008

17

On modes of recombination, replication, and segregation of the higher plant mitochondrial genome

Volker Brendel, Lee A. Segel

Journal:

Journal of Theoretical Biology

Year:

1987

Language:

english

File:

PDF, 595 KB

english, 1987

18

DNA, Words and Models—Statistics of Exceptional Words by S. Robin, F. Rodolphe, and S. Schbath

Journal:

Year:

2008

Language:

english

File:

PDF, 169 KB

english, 2008

19

Too many leucine zippers?

BRENDEL, VOLKER, KARLIN, SAMUEL

Journal:

Year:

1989

File:

PDF, 266 KB

1989

20

Test of the combinatorial model of intron recognition in a native maize gene

Maita J. Latijnhouwers, Claudio F. Pairoba, Volker Brendel, Virginia Walbot, Jose C. Carle-Urioste

Journal:

Plant Molecular Biology

Year:

1999

Language:

english

File:

PDF, 107 KB

english, 1999

21

Computational modeling of gene structure inArabidopsis thaliana

Volker Brendel, Wei Zhu

Journal:

Plant Molecular Biology

Year:

2002

Language:

english

File:

PDF, 460 KB

english, 2002

22

Circulating cytokines are associated with human islet graft function in type 1 diabetes

Christian Pfleger, Nanette C. Schloot, Mathias D. Brendel, Volker Burkart, Viktor Hogenkamp, Reinhard G. Bretzel, Clemens Jaeger, Michael Eckhard

Journal:

Clinical Immunology

Year:

2011

Language:

english

File:

PDF, 384 KB

english, 2011

23

Tracembler– software forin-silicochromosome walking in unassembled genomes

Qunfeng Dong, Matthew D Wilkerson, Volker Brendel

Journal:

BMC Bioinformatics

Year:

2007

Language:

english

File:

PDF, 269 KB

english, 2007

24

MetWAMer: eukaryotic translation initiation site prediction

Michael E Sparks, Volker Brendel

Journal:

BMC Bioinformatics

Year:

2008

Language:

english

File:

PDF, 966 KB

english, 2008

25

Cross-species EST alignments reveal novel and conserved alternative splicing events in legumes

Bing-Bing Wang, Mike O'Toole, Volker Brendel, Nevin D Young

Journal:

BMC Plant Biology

Year:

2008

Language:

english

File:

PDF, 388 KB

english, 2008

26

Quantitative Model of ColE1 Plasmid Copy Number Control

Volker Brendel, Alan S. Perelson

Journal:

Journal of Molecular Biology

Year:

1993

File:

PDF, 735 KB

1993

27

Prediction of splice sites in plant pre-mRNA from sequence properties

Volker Brendel, Jürgen Kleffe, Jose C Carle-Urioste, Virginia Walbot

Journal:

Journal of Molecular Biology

Year:

1998

Language:

english

File:

PDF, 370 KB

english, 1998

28

Gene structure prediction by spliced alignment of genomic DNA with protein sequences: increased accuracy by differential splice site scoring

Jonathan Usuka, Volker Brendel

Journal:

Journal of Molecular Biology

Year:

2000

Language:

english

File:

PDF, 298 KB

english, 2000

29

Community-based gene structure annotation

Shannon D. Schlueter, Matthew D. Wilkerson, Eva Huala, Seung Y. Rhee, Volker Brendel

Journal:

Trends in Plant Science

Year:

2005

Language:

english

File:

PDF, 118 KB

english, 2005

30

Regional mutagenesis using Dissociation in maize

Kevin R. Ahern, Prasit Deewatthanawong, Justin Schares, Michael Muszynski, Rebecca Weeks, Erik Vollbrecht, Jon Duvick, Volker P. Brendel, Thomas P. Brutnell

Journal:

Year:

2009

Language:

english

File:

PDF, 422 KB

english, 2009

31

ParsEval: parallel comparison and analysis of gene structure annotations

Daniel S Standage, Volker P Brendel

Journal:

BMC Bioinformatics

Year:

2012

Language:

english

File:

PDF, 312 KB

english, 2012

32

xGDB: open-source computational infrastructure for the integrated evaluation and analysis of genome features

Shannon D Schlueter, Matthew D Wilkerson, Qunfeng Dong, Volker Brendel

Journal:

Year:

2006

Language:

english

File:

PDF, 2.70 MB

english, 2006

33

yrGATE: a web-based gene-structure annotation tool for the identification and dissemination of eukaryotic genes

Matthew D Wilkerson, Shannon D Schlueter, Volker Brendel

Journal:

Year:

2006

Language:

english

File:

PDF, 493 KB

english, 2006

34

The ASRG database: identification and survey ofArabidopsis thalianagenes involved in pre-mRNA splicing

Bing-Bing Wang, Volker Brendel

Journal:

Year:

2004

Language:

english

File:

PDF, 397 KB

english, 2004

35

Comparative genomics ofArabidopsisand maize: prospects and limitations

Volker Brendel, Stefan Kurtz, Virginia Walbot

Journal:

Year:

2002

Language:

english

File:

PDF, 215 KB

english, 2002

36

A method to identify distinctive charge configurations in protein sequences, with application to human herpesvirus polypeptides

Karlin, Samuel, Blaisdell, B.Edwin, Mocarski, Edward S., Brendel, Volker

Journal:

Journal of Molecular Biology

Year:

1989

Language:

english

File:

PDF, 1.56 MB

english, 1989

37

First Clinical Experience With Extracorporeally Induced Destruction of Kidney Stones by Shock Waves

CHAUSSY, CHRISTIAN, SCHMIEDT, EGBERT, JOCHAM, DIETER, BRENDEL, WALTER, FORSSMANN, BERND, WALTHER, VOLKER

Journal:

The Journal of Urology

Year:

2002

Language:

english

File:

PDF, 931 KB

english, 2002

38

Current literature

Perelson, Alan S., Brendel, Volker

Journal:

Journal of Oral and Maxillofacial Surgery

Year:

1984

Language:

english

File:

PDF, 255 KB

english, 1984

39

5206344 Interleukin-2 muteins and polymer conjugation thereof

Perelson, Alan S., Brendel, Volker

Journal:

Biotechnology Advances

Year:

1994

Language:

english

File:

PDF, 62 KB

english, 1994

40

Kinetics of complementary RNA-RNA interaction involved in plasmid ColE1 copy number control

Perelson, Alan S., Brendel, Volker

Journal:

Journal of Molecular Biology

Year:

1989

Language:

english

File:

PDF, 1.17 MB

english, 1989

41

First clinical experience with extracorporeally induced destruction of kidney stones by shock waves

Chaussy, Christian, Schmiedt, Egbert, Jocham, Dieter, Brendel, Walter, Forssmann, Bernd, Walther, Volker

Journal:

The Journal of Urology

Year:

2002

Language:

english

File:

PDF, 571 KB

english, 2002

42

The missense errors in protein can be controlled by selective synonymous codon usage at the level of transcription

Konopka, Andrzej K., Brendel, Volker

Journal:

Year:

1985

Language:

english

File:

PDF, 298 KB

english, 1985

43

Charge Configurations in Viral Proteins

Samuel Karlin and Volker Brendel

Journal:

Proceedings of the National Academy of Sciences

Year:

1988

Language:

english

File:

PDF, 934 KB

english, 1988

44

Association of Charge Clusters with Functional Domains of Cellular Transcription Factors

Volker Brendel and Samuel Karlin

Journal:

Proceedings of the National Academy of Sciences

Year:

1989

Language:

english

File:

PDF, 903 KB

english, 1989

45

DNA, Words and Models: Statistics of Exceptional Wordsby S. Robin; F. Rodolphe; S. Schbath

Review by: Volker Brendel

Journal:

Year:

2008

Language:

english

File:

PDF, 537 KB

english, 2008

46

A compilation of soybean ESTs: generation and analysis

Shoemaker, Randy, Keim, Paul, Vodkin, Lila, Retzel, Ernest, Clifton, Sandra W, Waterston, Robert, Smoller, David, Coryell, Virginia, Khanna, Anupama, Erpelding, John, Gai, Xiaowu, Brendel, Volker, Rap

Journal:

Year:

2002

File:

PDF, 1.29 MB

2002

47

Linguistics of Nucleotide Sequences: Morphology and Comparison of Vocabularies

Brendel, Volker, Beckmann, Jacques S., Trifonov, Edward N.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1986

Language:

english

File:

PDF, 636 KB

english, 1986

48

Terminators of Transcription with RNA Polymerase from Escherichia coli: What They Look Like and How to Find Them

Brendel, Volker, Hamm, Greg H., Trifonov, Edward N.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1986

Language:

english

File:

PDF, 940 KB

english, 1986

49

Intervening Sequences Exhibit Distinct Vocabulary

Beckmann, Jacques S., Brendel, Volker, Trifonov, Edward N.

Journal:

Journal of Biomolecular Structure and Dynamics

Year:

1986

Language:

english

File:

PDF, 2.51 MB

english, 1986

50

Advances in Computational Biology || Statistical Analysis of Protein Sequences

Brendel, Volker

Year:

1996

Language:

english

File:

PDF, 1.93 MB

english, 1996

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